Graph button in Window

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bharath
Posts:3
Joined:13 Oct 2010 23:03
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Graph button in Window

Post by bharath » 13 Oct 2010 23:14

Hi all, I am trying to work with the samples. Everything works fine except the Window->Graph button.
Clicking on this does nothing. I am using Ubuntu 9.04. I am giving my log file report here.
During loading it is throwing Nullpointerexception(GraphTopComponent).

-------------------------------------------------------------------------------
>Log Session: Wednesday, October 13, 2010 5:56:47 PM EDT
>System Info:
Product Version = Gephi 0.7 beta
Operating System = Linux version 2.6.32-23-generic-pae running on i386
Java; VM; Vendor = 1.6.0_20; Java HotSpot(TM) Server VM 16.3-b01; Sun Microsystems Inc.
Runtime = Java(TM) SE Runtime Environment 1.6.0_20-b02
Java Home = /usr/lib/jvm/java-6-sun-1.6.0.20/jre
System Locale; Encoding = en_US (gephi07beta); UTF-8
Home Directory = /home/bd0077
Current Directory = /home/bd0077/Desktop/gephi-0.7-beta/bin
User Directory = /home/bd0077/.gephi07beta/dev
Installation = /home/bd0077/Desktop/gephi-0.7-beta/gephi07beta
/home/bd0077/Desktop/gephi-0.7-beta/platform
Boot & Ext. Classpath = /usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/resources.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/rt.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/sunrsasign.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/jsse.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/jce.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/charsets.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/classes:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/localedata.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/dnsns.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/sunjce_provider.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/sunpkcs11.jar
Application Classpath = /home/bd0077/Desktop/gephi-0.7-beta/platform/lib/boot.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/org-openide-modules.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/org-openide-util.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/org-openide-util-lookup.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_zh_TW.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_zh_TW.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_zh_TW.jar:/usr/lib/jvm/java-6-sun/lib/dt.jar:/usr/lib/jvm/java-6-sun/lib/tools.jar
Startup Classpath = /home/bd0077/Desktop/gephi-0.7-beta/platform/core/org-openide-filesystems.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/core.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_zh_TW.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_zh_TW.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/bin/./../gephi07beta/core/locale/core_gephi07beta.jar
-------------------------------------------------------------------------------
INFO [org.netbeans.core.startup.NbEvents]: Turning on modules:
org.openide.util.lookup [8.3.1 201007282301]
org.openide.util [8.6.1 201007282301]
org.openide.modules [7.17.1 201007282301]
org.netbeans.libs.junit4 [1.9.1 201007282301]
org.gephi.utils.longtask [0.7.1 100930]
org.openide.filesystems [7.38.2 201007282301]
org.gephi.project.api [0.7.1 100930]
org.gephi.graph.api [0.7.1.3 101012]
org.gephi.data.attributes.api [0.7.1.1 100930]
org.netbeans.bootstrap/1 [2.33.1 201007282301]
org.openide.awt [7.23.1 201007282301]
org.netbeans.api.progress/1 [1.20.2 201007282301]
org.openide.dialogs [7.15.1 201007282301]
org.gephi.lib.javacsv [2.0 100930]
org.gephi.utils [0.7.1.1 101012]
org.gephi.io.database.drivers [0.7.1 100930]
org.gephi.dynamic.api [0.7.1 100930]
org.gephi.io.importer.api [0.7.1.2 100930]
org.gephi.io.generator.api [0.7.1 100930]
org.jfree [1.0 100930]
org.gephi.lib.validation [0.4 100930]
org.jdesktop.swingx [1.6.1 100930]
org.gephi.ui.utils [0.7.1 100930]
org.gephi.desktop.mrufiles.api [0.7.1 100930]
org.openide.nodes [7.16.1 201007282301]
org.openide.windows [6.33.1 201007282301]
org.gephi.desktop.project [0.7.1 100930]
org.gephi.io.processor.plugin [0.7.1.1 101001]
org.gephi.desktop.generate [0.7.1 100930]
org.gephi.io.exporter.api [0.7.1.2 100930]
org.netbeans.modules.editor.mimelookup/1 [1.16.1 201007282301]
org.openide.text [6.30.1 201007282301]
org.netbeans.swing.tabcontrol [1.21.1 201007282301]
org.netbeans.swing.outline [1.9.1 201007282301]
org.openide.explorer [6.28.2 201007282301]
org.openide.actions [6.16.1 201007282301]
org.netbeans.core.startup/1 [1.25.1 201007282301]
org.netbeans.modules.autoupdate.services [1.20.1 201007282301]
org.netbeans.spi.quicksearch [1.6.1 201007282301]
org.netbeans.modules.queries/1 [1.19.1 201007282301]
org.openide.loaders [7.16.1 201007282301]
org.netbeans.modules.keyring [1.1.2 201007282301]
org.openide.io [1.23.1 201007282301]
org.netbeans.swing.plaf [1.16.1 201007282301]
org.netbeans.core/2 [3.20.2 201007282301]
org.netbeans.modules.options.api/1 [1.18.1 201007282301]
org.netbeans.modules.autoupdate.ui [1.16.1 201007282301]
org.gephi.filters.api [0.7.1 100930]
org.gephi.timeline [0.7.1 100930]
org.netbeans.modules.settings/1 [1.26.1 201007282301]
org.joda.time [1.0 100930]
org.gephi.lib.flamingo [5.0 100930]
org.gephi.lib.commons.codec [1.4 100930]
org.gephi.ui.components [0.7.1 100930]
org.gephi.desktop.timeline [0.7.1 100930]
org.gephi.statistics.api [0.7.1.1 101003]
org.gephi.statistics.plugin [0.7.1 100930]
org.gephi.utils.collection [0.7.1 100930]
org.gephi.partition.api [0.7.1.1 101012]
org.gephi.filters.plugin [0.7.1 100930]
org.gephi.ui.filters.plugin [0.7.1 100930]
org.gephi.layout.api [0.7.1.1 101003]
org.gephi.ui.propertyeditor [0.7.1 100930]
org.gephi.layout.plugin [0.7.1.1 101006]
org.gephi.geometricTransformation [1.0 100511]
org.gephi.io.generator.plugin [0.7.1 100930]
org.gephi.desktop.perspective [0.7.1 100930]
org.gephi.ranking.api [0.7.1 100930]
org.gephi.tools.api [0.7.1 100930]
org.gephi.datalab.api [0.7.1.3 101012]
org.gephi.visualization.api [0.7.1.1 101012]
org.gephi.lib.gleem [1.0 100930]
org.gephi.lib.jogl [1.1.0.1 100930]
org.gephi.visualization [0.7.1.2 101012]
org.gephi.datalab.plugin [0.7.1.1 101012]
org.gephi.desktop.datalab [0.7.1.2 101012]
org.gephi.algorithms [0.7.1 100930]
org.gephi.desktop.io.export [0.7.1.1 100930]
org.gephi.desktop.filters [0.7.1.1 101012]
org.gephi.lib.beansbinding [1.2.1 100930]
org.gephi.ui.processor.plugin [0.7.1 100930]
org.gephi.plugins.layout.geo [1.0.2 100519]
org.gephi.lib.itext [5.0.1 100930]
org.gephi.lib.batik [1.7 100930]
org.gephi.preview.api [0.7.1 100930]
org.gephi.io.exporter.preview [0.7.1.1 100930]
org.gephi.plugins.seadragon [0.1 101002]
org.gephi.lib.staxutils [1.0 100930]
org.gephi.io.exporter.plugin [0.7.1.4 101012]
org.gephi.tools.plugin [0.7.1 100930]
org.gephi.ui.workspace [0.7.1 100930]
org.gephi.layout.plugin.drl [1.0 101012]
org.gephi.dynamic [0.7.1.2 101004]
org.netbeans.libs.jna/1 [1.7.2 201007282301]
org.netbeans.core.windows/2 [2.21.1 201007282301]
org.netbeans.core.nativeaccess/1 [1.7.1 201007282301]
org.gephi.clustering.api [0.7.1 100930]
org.gephi.clustering.plugin [0.7.1 100930]
org.gephi.io.spigot.plugin [0.8 100930]
org.netbeans.core.io.ui/1 [1.8.1 201007282301]
org.gephi.desktop.spigot [0.8 100930]
org.gephi.lib.processing [1.0.9 100930]
org.gephi.preview [0.7.1.3 101012]
org.gephi.plugins.seadragon.ui [0.1 101002]
org.gephi.plugins.seadragonweb [0.2 101002]
org.gephi.desktop.statistics [0.7.1 100930]
org.gephi.ui.components.SplineEditor [0.7 100930]
org.netbeans.modules.favorites/1 [1.20.1 201007282301]
org.gephi.filters [0.7.1 100930]
org.netbeans.modules.options.keymap [1.10.1 201007282301]
org.netbeans.swing.dirchooser [1.0 100930]
org.gephi.plugins.layout.noverlap [1.1 100519]
org.netbeans.modules.sendopts/2 [2.9.1 201007282301]
org.gephi.desktop.ranking [0.7.1 100930]
org.netbeans.modules.print [7.5.1 201007282301]
org.gephi.desktop.layout [0.7.1.1 101003]
org.netbeans.modules.editor.mimelookup.impl/1 [1.9.1 201007282301]
org.gephi.partition.plugin [0.7.1 100930]
org.netbeans.modules.masterfs/2 [2.25.2 201007282301]
org.gephi.desktop.context [0.7.1 100930]
org.gephi.desktop.tools [0.7.1 100930]
org.gephi.data.attributes [0.7.1.2 100930]
org.gephi.desktop.progress [0.7.1 100930]
org.gephi.io.importer.plugin [0.7.1.2 100930]
org.gephi.ui.importer.plugin [0.7.1 100930]
org.gephi.ui.partition.plugin [0.7.1 100930]
org.gephi.ui.exporter.preview [0.7.1.1 100930]
org.gephi.branding.desktop [0.7.1 100930]
org.gephi.desktop.hierarchy [0.7.1 100930]
org.gephi.ui.exporter.plugin [0.7.1.1 100930]
org.netbeans.modules.progress.ui [1.12.1 201007282301]
org.gephi.desktop.importer [0.7.1.3 100930]
org.gephi.desktop.clustering [0.7.1 100930]
org.netbeans.modules.keyring.impl [1.0.1 201007282301]
org.gephi.desktop.welcome [0.7.1 100930]
org.gephi.desktop.preview [0.7.1.1 101012]
org.netbeans.core.ui/1 [1.22.1 201007282301]
org.gephi.graph.dhns [0.7.1.5 101012]
org.gephi.desktop.partition [0.7.1 100930]
org.gephi.ui.spigot.plugin [0.8 100930]
org.gephi.ui.generator.plugin [0.7.1 100930]
org.gephi.ui.statistics.plugin [0.7.1 100930]
org.gephi.ui.project [0.7.1 100930]
org.gephi.ui.ranking.plugin [0.7.1 100930]
Loading native libraries
INFO [org.netbeans.core.windows.persistence]: [PersistenceManager.getTopComponentForID] Problem when deserializing TopComponent for tcID:'GraphTopComponent'. Reason: Error reading MultiFileObject@19d0e0b[Windows2Local/Components/GraphTopComponent.settings]: java.lang.reflect.InvocationTargetException
Content:
<?xml version="1.0" encoding="UTF-8"?>

<!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd">
<settings version="1.0">
<module name="org.gephi.visualization" spec="1.0"/>
<instanceof class="org.openide.windows.TopComponent"/>
<instanceof class="org.gephi.visualization.component.GraphTopComponent"/>
<instance class="org.gephi.visualization.component.GraphTopComponent" method="getDefault"/>
</settings>

Method: getDefault
Class: class org.gephi.visualization.component.GraphTopComponent
Content:
<?xml version="1.0" encoding="UTF-8"?>

<!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd">
<settings version="1.0">
<module name="org.gephi.visualization" spec="1.0"/>
<instanceof class="org.openide.windows.TopComponent"/>
<instanceof class="org.gephi.visualization.component.GraphTopComponent"/>
<instance class="org.gephi.visualization.component.GraphTopComponent" method="getDefault"/>
</settings>

Method: getDefault
Class: class org.gephi.visualization.component.GraphTopComponent
Caused: java.lang.IllegalArgumentException: GLDrawableFactory.chooseGraphicsConfiguration() was not used when creating this Component
at com.sun.opengl.impl.x11.X11GLDrawableFactory.getGLDrawable(X11GLDrawableFactory.java:238)
at javax.media.opengl.GLCanvas.<init>(GLCanvas.java:142)
at javax.media.opengl.GLCanvas.<init>(GLCanvas.java:90)
at org.gephi.visualization.swing.GraphCanvas.<init>(GraphCanvas.java:49)
at org.gephi.visualization.config.VizCommander.createCanvas(VizCommander.java:33)
at org.gephi.visualization.VizController.initInstances(VizController.java:113)
at org.gephi.visualization.VizController.getInstance(VizController.java:69)
at org.gephi.visualization.component.GraphTopComponent.<init>(GraphTopComponent.java:62)
at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210)
Caused: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:673)
Caused: java.io.IOException: Error reading MultiFileObject@19d0e0b[Windows2Local/Components/GraphTopComponent.settings]
at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:681)
at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.instanceCreate(XMLSettingsSupport.java:584)
at org.netbeans.modules.settings.convertors.SerialDataConvertor$SettingsInstance.instanceCreate(SerialDataConvertor.java:423)
at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentPersistentForID(PersistenceManager.java:533)
at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentForID(PersistenceManager.java:643)
at org.netbeans.core.windows.PersistenceHandler.getTopComponentForID(PersistenceHandler.java:460)
at org.netbeans.core.windows.PersistenceHandler.initModeFromConfig(PersistenceHandler.java:421)
at org.netbeans.core.windows.PersistenceHandler.load(PersistenceHandler.java:206)
at org.netbeans.core.windows.WindowSystemImpl.load(WindowSystemImpl.java:73)
at org.netbeans.core.GuiRunLevel$2.run(GuiRunLevel.java:181)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:137)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
[catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Content:
<?xml version="1.0" encoding="UTF-8"?>

<!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd">
<settings version="1.0">
<module name="org.gephi.visualization" spec="1.0"/>
<instanceof class="org.openide.windows.TopComponent"/>
<instanceof class="org.gephi.visualization.component.GraphTopComponent"/>
<instance class="org.gephi.visualization.component.GraphTopComponent" method="getDefault"/>
</settings>
ALL [null]: Method: getDefault
ALL [null]: Class: class org.gephi.visualization.component.GraphTopComponent
Diagnostic information
Input arguments:
-Djdk.home=/usr/lib/jvm/java-6-sun
-Dnetbeans.system_http_proxy=DIRECT
-Dnetbeans.system_http_non_proxy_hosts=
-Dnetbeans.dirs=./../gephi07beta:./../
:
-Dnetbeans.home=/home/bd0077/Desktop/gephi-0.7-beta/platform
-Xms2g
-Xmx2g
-Dsun.java2d.noddraw=true
-Dsun.awt.noerasebackground=true
-Duser.language=en
-XX:+HeapDumpOnOutOfMemoryError
-XX:HeapDumpPath=/home/bd0077/.gephi07beta/dev/var/log/heapdump.hprof
Compiler: HotSpot Tiered Compilers
Heap memory usage: initial 2048.0MB maximum 1962.7MB
Non heap memory usage: initial 18.2MB maximum 112.0MB
Garbage collector: PS Scavenge (Collections=0 Total time spent=0s)
Garbage collector: PS MarkSweep (Collections=0 Total time spent=0s)
Classes: loaded=4973 total loaded=4973 unloaded 0
INFO [org.netbeans.core.ui.warmup.DiagnosticTask]: Total memory 4,174,569,472
INFO [null]: Total physical memory 4,174,569,472
WARNING [org.openide.filesystems.Ordering]: Not all children in Menu/Window/ marked with the position attribute: [TimelineAction.shadow], but some are: [ClusteringAction.shadow, ContextAction.shadow, DataTableAction.shadow, FiltersAction.shadow, GraphAction.shadow, HierarchyAction.shadow, LayoutAction.shadow, PartitionAction.shadow, PreviewAction.shadow, PreviewSettingsAction.shadow, RankingAction.shadow, StatisticsAction.shadow, WelcomeAction.shadow, Separator3.instance, CloseWindowAction.shadow, MaximizeWindowAction.shadow, org-netbeans-core-windows-actions-UndockAction.shadow, Separator4.instance, Separator4_1.instance]
# Nodes loaded: 3418
# Edges loaded: 62452
WARNING [org.netbeans.modules.autoupdate.updateproviders.AutoupdateCatalogFactory]: Services/AutoupdateType/org_gephi_branding_desktop_update_center.instance: url_key attribute deprecated in favor of url
WARNING [org.netbeans.modules.autoupdate.updateproviders.AutoupdateCatalogFactory]: Services/AutoupdateType/org_gephi_branding_desktop_update_center_1.instance: url_key attribute deprecated in favor of url
WARNING [org.gephi.visualization.component.GraphTopComponent]: Cannot find GraphTopComponent component. It will not be located properly in the window system.
INFO [org.netbeans.core.startup.layers.BinaryFS]: value = org.gephi.visualization.component.GraphTopComponent.findInstance from Actions/Window/org-gephi-visualization-component-GraphAction.instance
java.lang.NullPointerException
at org.gephi.visualization.component.VizBarController$LabelGroupBar.getToolbarComponents(VizBarController.java:418)
at org.gephi.visualization.component.VizToolbar.<init>(VizToolbar.java:43)
at org.gephi.visualization.component.VizBarController.getToolbar(VizBarController.java:90)
at org.gephi.visualization.component.GraphTopComponent.initCollapsePanel(GraphTopComponent.java:91)
at org.gephi.visualization.component.GraphTopComponent.<init>(GraphTopComponent.java:65)
at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210)
at org.gephi.visualization.component.GraphTopComponent.findInstance(GraphTopComponent.java:223)
Caused: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.netbeans.core.startup.layers.BinaryFS$AttrImpl$MethodAndParams.invoke(BinaryFS.java:607)
at org.netbeans.core.startup.layers.BinaryFS$AttrImpl.getValue(BinaryFS.java:540)
at org.netbeans.core.startup.layers.BinaryFS$BFSBase.getAttribute(BinaryFS.java:386)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:907)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:844)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:903)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:844)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:772)
at org.netbeans.core.startup.layers.BinaryFS$FileMap.get(BinaryFS.java:955)
at org.openide.windows.OpenComponentAction.getTopComponent(OpenComponentAction.java:74)
at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:80)
at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:137)
at org.openide.util.actions.ActionInvoker$1.run(ActionInvoker.java:95)
at org.openide.util.actions.ActionInvoker.doPerformAction(ActionInvoker.java:116)
at org.openide.util.actions.ActionInvoker.invokeAction(ActionInvoker.java:99)
at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:140)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242)
at javax.swing.AbstractButton.doClick(AbstractButton.java:357)
at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1223)
at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1264)
at java.awt.Component.processMouseEvent(Component.java:6263)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3267)
at java.awt.Component.processEvent(Component.java:6028)
at java.awt.Container.processEvent(Container.java:2041)
at java.awt.Component.dispatchEventImpl(Component.java:4630)
at java.awt.Container.dispatchEventImpl(Container.java:2099)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168)
at java.awt.Container.dispatchEventImpl(Container.java:2085)
at java.awt.Window.dispatchEventImpl(Window.java:2478)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:599)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:137)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
[catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
SEVERE [global]
java.lang.NullPointerException
at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:81)
at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:137)
at org.openide.util.actions.ActionInvoker$1.run(ActionInvoker.java:95)
at org.openide.util.actions.ActionInvoker.doPerformAction(ActionInvoker.java:116)
at org.openide.util.actions.ActionInvoker.invokeAction(ActionInvoker.java:99)
at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:140)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242)
at javax.swing.AbstractButton.doClick(AbstractButton.java:357)
at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1223)
at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1264)
at java.awt.Component.processMouseEvent(Component.java:6263)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3267)
at java.awt.Component.processEvent(Component.java:6028)
at java.awt.Container.processEvent(Container.java:2041)
at java.awt.Component.dispatchEventImpl(Component.java:4630)
at java.awt.Container.dispatchEventImpl(Container.java:2099)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168)
at java.awt.Container.dispatchEventImpl(Container.java:2085)
at java.awt.Window.dispatchEventImpl(Window.java:2478)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:599)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:137)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
[catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)




Thanks,

bharath
Top
User avatar
mbastian
Gephi Architect
Posts:728
Joined:10 Dec 2009 10:11
Location:San Francisco, CA
[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable

Re: Graph button in Window

Post by mbastian » 14 Oct 2010 08:54

As I can see from this line " at com.sun.opengl.impl.x11.X11GLDrawableFactory.getGLDrawable(X11GLDrawableFactory.java:238)" this is a graphic issue. Do you have your graphic card driver up to date? Check if OpenGL is properly working on your linux.

See also http://gephi.org/users/detect-and-fix-g ... -problems/
Top
bharath
Posts:3
Joined:13 Oct 2010 23:03
[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable

Re: Graph button in Window

Post by bharath » 15 Oct 2010 21:48

My jogl is functioning properly.
tried with the example here
http://en.wikipedia.org/wiki/Java_OpenGL
my opengl is perfect.
But I am still getting the error when I click on the graph button.
I am running with ./gephi07beta everything works fine except that one button,
Here is the driver, nvidia the best as suggested by forums and I have GLX version here
glxinfo | grep version

server glx version string: 1.2
client glx version string: 1.4
GLX version: 1.2
OpenGL version string: 2.1 Mesa 7.7.1
OpenGL shading language version string: 1.20


01:00.0 VGA compatible controller: nVidia Corporation Device 06fd (rev a1)


Please suggest me any changes I need to perform
.

Thank you so much for your help,
Bharath

-------------------------------------------------------------------------------
>Log Session: Friday, October 15, 2010 4:38:22 PM EDT
>System Info:
Product Version = Gephi 0.7 beta
Operating System = Linux version 2.6.32-23-generic-pae running on i386
Java; VM; Vendor = 1.6.0_20; Java HotSpot(TM) Server VM 16.3-b01; Sun Microsystems Inc.
Runtime = Java(TM) SE Runtime Environment 1.6.0_20-b02
Java Home = /usr/lib/jvm/java-6-sun-1.6.0.20/jre
System Locale; Encoding = en_US (gephi07beta); UTF-8
Home Directory = /home/bd0077
Current Directory = /home/bd0077/Desktop
User Directory = /home/bd0077/.gephi07beta/dev
Installation = /home/bd0077/Desktop/gephi-0.7-beta/gephi07beta
/home/bd0077/Desktop/gephi-0.7-beta/platform

org.openide.util.lookup [8.3.1 201007282301]
org.openide.util [8.6.1 201007282301]
org.openide.modules [7.17.1 201007282301]
org.netbeans.swing.plaf [1.16.1 201007282301]
org.netbeans.libs.junit4 [1.9.1 201007282301]
org.gephi.utils.longtask [0.7.1 100930]
org.openide.filesystems [7.38.2 201007282301]
org.gephi.project.api [0.7.1 100930]
org.gephi.graph.api [0.7.1.3 101012]
org.gephi.data.attributes.api [0.7.1.1 100930]
org.gephi.dynamic.api [0.7.1 100930]
org.gephi.lib.javacsv [2.0 100930]
org.gephi.utils [0.7.1.1 101012]
org.gephi.datalab.api [0.7.1.3 101012]
org.gephi.lib.flamingo [5.0 100930]
org.gephi.clustering.api [0.7.1 100930]
org.gephi.clustering.plugin [0.7.1 100930]
org.openide.awt [7.23.1 201007282301]
org.netbeans.api.progress/1 [1.20.2 201007282301]
org.openide.dialogs [7.15.1 201007282301]
org.gephi.io.database.drivers [0.7.1 100930]
org.gephi.io.importer.api [0.7.1.3 101015]
org.gephi.io.spigot.plugin [0.8 100930]
org.gephi.io.processor.plugin [0.7.1.1 101001]
org.gephi.tools.api [0.7.1 100930]
org.gephi.ui.spigot.plugin [0.8 100930]
org.gephi.lib.beansbinding [1.2.1 100930]
org.openide.nodes [7.16.1 201007282301]
org.openide.windows [6.33.1 201007282301]
org.netbeans.modules.editor.mimelookup/1 [1.16.1 201007282301]
org.openide.text [6.30.1 201007282301]
org.netbeans.swing.tabcontrol [1.21.1 201007282301]
org.netbeans.swing.outline [1.9.1 201007282301]
org.openide.explorer [6.28.2 201007282301]
org.openide.actions [6.16.1 201007282301]
org.netbeans.bootstrap/1 [2.33.1 201007282301]
org.netbeans.core.startup/1 [1.25.1 201007282301]
org.netbeans.modules.queries/1 [1.19.1 201007282301]
org.openide.loaders [7.16.1 201007282301]
org.netbeans.modules.settings/1 [1.26.1 201007282301]
org.gephi.visualization.api [0.7.1.1 101012]
org.jfree [1.0 100930]
org.gephi.lib.validation [0.4 100930]
org.jdesktop.swingx [1.6.1 100930]
org.gephi.ui.utils [0.7.1 100930]
org.netbeans.spi.quicksearch [1.6.1 201007282301]
org.netbeans.modules.keyring [1.1.2 201007282301]
org.openide.io [1.23.1 201007282301]
org.netbeans.core/2 [3.20.2 201007282301]
org.netbeans.modules.options.api/1 [1.18.1 201007282301]
org.gephi.lib.gleem [1.0 100930]
org.gephi.lib.jogl [1.1.0.1 100930]
org.gephi.utils.collection [0.7.1 100930]
org.gephi.lib.commons.codec [1.4 100930]
org.gephi.ui.components [0.7.1 100930]
org.gephi.desktop.mrufiles.api [0.7.1 100930]
org.gephi.desktop.project [0.7.1 100930]
org.gephi.visualization [0.7.1.7 101015]
org.gephi.datalab.plugin [0.7.1.1 101012]
org.gephi.io.importer.plugin [0.7.1.5 101015]
org.gephi.ui.importer.plugin [0.7.1 100930]
org.netbeans.modules.favorites/1 [1.20.1 201007282301]
org.gephi.graph.dhns [0.7.1.5 101012]
org.gephi.preview.api [0.7.1 100930]
org.gephi.desktop.welcome [0.7.1 100930]
org.netbeans.libs.jna/1 [1.7.2 201007282301]
org.netbeans.core.windows/2 [2.21.1 201007282301]
org.netbeans.core.nativeaccess/1 [1.7.1 201007282301]
org.gephi.statistics.api [0.7.1.1 101003]
org.gephi.statistics.plugin [0.7.1 100930]
org.gephi.filters.api [0.7.1 100930]
org.gephi.timeline [0.7.1 100930]
org.gephi.partition.api [0.7.1.2 101014]
org.gephi.filters.plugin [0.7.1 100930]
org.gephi.lib.itext [5.0.1 100930]
org.joda.time [1.0 100930]
org.gephi.desktop.timeline [0.7.1 100930]
org.gephi.ui.propertyeditor [0.7.1 100930]
org.gephi.layout.api [0.7.1.1 101003]
org.gephi.plugins.layout.geo [1.0.2 100519]
org.gephi.lib.batik [1.7 100930]
org.gephi.io.exporter.api [0.7.1.2 100930]
org.gephi.io.exporter.preview [0.7.1.1 100930]
org.netbeans.modules.keyring.impl [1.0.1 201007282301]
org.gephi.lib.processing [1.0.9 100930]
org.gephi.preview [0.7.1.3 101012]
org.gephi.ui.components.SplineEditor [0.7 100930]
org.gephi.ranking.api [0.7.1 100930]
org.gephi.desktop.ranking [0.7.1 100930]
org.gephi.ui.workspace [0.7.1 100930]
org.gephi.ui.exporter.preview [0.7.1.1 100930]
org.gephi.desktop.hierarchy [0.7.1 100930]
org.gephi.desktop.spigot [0.8 100930]
org.netbeans.modules.options.keymap [1.10.1 201007282301]
org.gephi.layout.plugin [0.7.1.1 101006]
org.gephi.plugins.layout.noverlap [1.1 100519]
org.netbeans.modules.autoupdate.services [1.20.1 201007282301]
org.gephi.algorithms [0.7.1 100930]
org.gephi.desktop.layout [0.7.1.1 101003]
org.gephi.desktop.io.export [0.7.1.1 100930]
org.gephi.desktop.preview [0.7.1.1 101012]
org.gephi.io.generator.api [0.7.1 100930]
org.gephi.io.generator.plugin [0.7.1 100930]
org.gephi.ui.generator.plugin [0.7.1 100930]
org.gephi.geometricTransformation [1.0 100511]
org.netbeans.modules.progress.ui [1.12.1 201007282301]
org.gephi.desktop.filters [0.7.1.1 101012]
org.netbeans.modules.sendopts/2 [2.9.1 201007282301]
org.gephi.desktop.statistics [0.7.1 100930]
org.netbeans.modules.editor.mimelookup.impl/1 [1.9.1 201007282301]
org.netbeans.modules.masterfs/2 [2.25.2 201007282301]
org.gephi.lib.staxutils [1.0 100930]
org.gephi.io.exporter.plugin [0.7.1.5 101014]
org.gephi.ui.exporter.plugin [0.7.1.1 100930]
org.gephi.partition.plugin [0.7.1 100930]
org.gephi.data.attributes [0.7.1.2 100930]
org.gephi.desktop.importer [0.7.1.3 100930]
org.gephi.desktop.perspective [0.7.1 100930]
org.netbeans.core.io.ui/1 [1.8.1 201007282301]
org.gephi.desktop.context [0.7.1 100930]
org.netbeans.core.ui/1 [1.22.1 201007282301]
org.gephi.ui.partition.plugin [0.7.1.1 101014]
org.gephi.plugins.seadragon [0.1 101002]
org.gephi.plugins.seadragon.ui [0.1 101002]
org.gephi.desktop.clustering [0.7.1 100930]
org.gephi.ui.filters.plugin [0.7.1 100930]
org.netbeans.modules.print [7.5.1 201007282301]
org.gephi.desktop.progress [0.7.1 100930]
org.gephi.plugins.seadragonweb [0.2 101002]
org.gephi.ui.processor.plugin [0.7.1 100930]
org.gephi.ui.statistics.plugin [0.7.1 100930]
org.gephi.ui.project [0.7.1 100930]
org.gephi.layout.plugin.drl [1.0 101012]
org.gephi.desktop.generate [0.7.1 100930]
org.gephi.dynamic [0.7.1.2 101004]
org.gephi.desktop.partition [0.7.1 100930]
org.gephi.filters [0.7.1 100930]
org.netbeans.modules.autoupdate.ui [1.16.1 201007282301]
org.gephi.branding.desktop [0.7.1 100930]
org.netbeans.swing.dirchooser [1.0 100930]
org.gephi.ui.ranking.plugin [0.7.1 100930]
org.gephi.desktop.datalab [0.7.1.3 101015]
org.gephi.desktop.tools [0.7.1 100930]
org.gephi.tools.plugin [0.7.1 100930]
Loading native libraries
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.gephi.lib.jogl.JOGLNativesInstaller$1.run(JOGLNativesInstaller.java:102)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:199)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Caused by: java.lang.UnsatisfiedLinkError: com.sun.opengl.impl.x11.DRIHack.dlopen(Ljava/lang/String;)J
at com.sun.opengl.impl.x11.DRIHack.dlopen(Native Method)
at com.sun.opengl.impl.x11.DRIHack.begin(DRIHack.java:108)
... 13 more
INFO [org.netbeans.core.windows.persistence]: [PersistenceManager.getTopComponentForID] Problem when deserializing TopComponent for tcID:'GraphTopComponent'. Reason: Error reading MultiFileObject@b55c7f[Windows2Local/Components/GraphTopComponent.settings]: java.lang.reflect.InvocationTargetException
Content:
<?xml version="1.0" encoding="UTF-8"?>

<!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd">
<settings version="1.0">
<module name="org.gephi.visualization" spec="1.0"/>
<instanceof class="org.openide.windows.TopComponent"/>
<instanceof class="org.gephi.visualization.component.GraphTopComponent"/>
<instance class="org.gephi.visualization.component.GraphTopComponent" method="getDefault"/>
</settings>

Method: getDefault
Class: class org.gephi.visualization.component.GraphTopComponent
Content:
<?xml version="1.0" encoding="UTF-8"?>

<!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd">
<settings version="1.0">
<module name="org.gephi.visualization" spec="1.0"/>
<instanceof class="org.openide.windows.TopComponent"/>
<instanceof class="org.gephi.visualization.component.GraphTopComponent"/>
<instance class="org.gephi.visualization.component.GraphTopComponent" method="getDefault"/>
</settings>

Method: getDefault
Class: class org.gephi.visualization.component.GraphTopComponent
Caused: java.lang.UnsatisfiedLinkError: com.sun.opengl.impl.x11.DRIHack.dlopen(Ljava/lang/String;)J
at com.sun.opengl.impl.x11.DRIHack.dlopen(Native Method)
at com.sun.opengl.impl.x11.DRIHack.begin(DRIHack.java:108)
at com.sun.opengl.impl.x11.X11GLDrawableFactory.<clinit>(X11GLDrawableFactory.java:67)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:169)
at javax.media.opengl.GLDrawableFactory.getFactory(GLDrawableFactory.java:111)
at javax.media.opengl.GLCanvas.<init>(GLCanvas.java:113)
at javax.media.opengl.GLCanvas.<init>(GLCanvas.java:82)
at org.gephi.visualization.swing.GraphCanvas.<init>(GraphCanvas.java:49)
at org.gephi.visualization.config.VizCommander.createCanvas(VizCommander.java:33)
at org.gephi.visualization.VizController.initInstances(VizController.java:113)
at org.gephi.visualization.VizController.getInstance(VizController.java:69)
at org.gephi.visualization.component.GraphTopComponent.<init>(GraphTopComponent.java:62)
at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210)
Caused: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:673)
Caused: java.io.IOException: Error reading MultiFileObject@b55c7f[Windows2Local/Components/GraphTopComponent.settings]
at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:681)
at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.instanceCreate(XMLSettingsSupport.java:584)
at org.netbeans.modules.settings.convertors.SerialDataConvertor$SettingsInstance.instanceCreate(SerialDataConvertor.java:423)
at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentPersistentForID(PersistenceManager.java:533)
at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentForID(PersistenceManager.java:643)
at org.netbeans.core.windows.PersistenceHandler.getTopComponentForID(PersistenceHandler.java:460)
at org.netbeans.core.windows.PersistenceHandler.initModeFromConfig(PersistenceHandler.java:421)
at org.netbeans.core.windows.PersistenceHandler.load(PersistenceHandler.java:206)
at org.netbeans.core.windows.WindowSystemImpl.load(WindowSystemImpl.java:73)
at org.netbeans.core.GuiRunLevel$2.run(GuiRunLevel.java:181)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:137)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
[catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Content:
<?xml version="1.0" encoding="UTF-8"?>

<!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd">
<settings version="1.0">
<module name="org.gephi.visualization" spec="1.0"/>
<instanceof class="org.openide.windows.TopComponent"/>
<instanceof class="org.gephi.visualization.component.GraphTopComponent"/>
<instance class="org.gephi.visualization.component.GraphTopComponent" method="getDefault"/>
</settings>
ALL [null]: Method: getDefault
ALL [null]: Class: class org.gephi.visualization.component.GraphTopComponent
Diagnostic information
Input arguments:
-Djdk.home=/usr/lib/jvm/java-6-sun
-Dnetbeans.system_http_proxy=DIRECT
-Dnetbeans.system_http_non_proxy_hosts=
-Dnetbeans.dirs=./gephi-0.7-beta/bin/../gephi07beta:./gephi-0.7-beta/bin/../
:
-Dnetbeans.home=/home/bd0077/Desktop/gephi-0.7-beta/platform
-Xms2g
-Xmx2g
-Dsun.java2d.noddraw=true
-Dsun.awt.noerasebackground=true
-Duser.language=en
-XX:+HeapDumpOnOutOfMemoryError
-XX:HeapDumpPath=/home/bd0077/.gephi07beta/dev/var/log/heapdump.hprof
Compiler: HotSpot Tiered Compilers
Heap memory usage: initial 2048.0MB maximum 1962.7MB
Non heap memory usage: initial 18.2MB maximum 112.0MB
Garbage collector: PS Scavenge (Collections=0 Total time spent=0s)
Garbage collector: PS MarkSweep (Collections=0 Total time spent=0s)
Classes: loaded=5106 total loaded=5106 unloaded 0
INFO [org.netbeans.core.ui.warmup.DiagnosticTask]: Total memory 4,174,569,472
INFO [null]: Total physical memory 4,174,569,472
WARNING [org.openide.filesystems.Ordering]: Not all children in Menu/Window/ marked with the position attribute: [TimelineAction.shadow], but some are: [ClusteringAction.shadow, ContextAction.shadow, DataTableAction.shadow, FiltersAction.shadow, GraphAction.shadow, HierarchyAction.shadow, LayoutAction.shadow, PartitionAction.shadow, PreviewAction.shadow, PreviewSettingsAction.shadow, RankingAction.shadow, StatisticsAction.shadow, WelcomeAction.shadow, Separator3.instance, CloseWindowAction.shadow, MaximizeWindowAction.shadow, org-netbeans-core-windows-actions-UndockAction.shadow, Separator4.instance, Separator4_1.instance]
# Nodes loaded: 3418
# Edges loaded: 62452
WARNING [org.gephi.visualization.component.GraphTopComponent]: Cannot find GraphTopComponent component. It will not be located properly in the window system.
INFO [org.netbeans.core.startup.layers.BinaryFS]: value = org.gephi.visualization.component.GraphTopComponent.findInstance from Actions/Window/org-gephi-visualization-component-GraphAction.instance
java.lang.NullPointerException
at org.gephi.visualization.component.VizBarController$LabelGroupBar.getToolbarComponents(VizBarController.java:418)
at org.gephi.visualization.component.VizToolbar.<init>(VizToolbar.java:43)
at org.gephi.visualization.component.VizBarController.getToolbar(VizBarController.java:90)
at org.gephi.visualization.component.GraphTopComponent.initCollapsePanel(GraphTopComponent.java:91)
at org.gephi.visualization.component.GraphTopComponent.<init>(GraphTopComponent.java:65)
at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210)
at org.gephi.visualization.component.GraphTopComponent.findInstance(GraphTopComponent.java:223)
Caused: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.netbeans.core.startup.layers.BinaryFS$AttrImpl$MethodAndParams.invoke(BinaryFS.java:607)
at org.netbeans.core.startup.layers.BinaryFS$AttrImpl.getValue(BinaryFS.java:540)
at org.netbeans.core.startup.layers.BinaryFS$BFSBase.getAttribute(BinaryFS.java:386)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:907)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:844)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:903)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:844)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:772)
at org.netbeans.core.startup.layers.BinaryFS$FileMap.get(BinaryFS.java:955)
at org.openide.windows.OpenComponentAction.getTopComponent(OpenComponentAction.java:74)
at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:80)
at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:137)
at org.openide.util.actions.ActionInvoker$1.run(ActionInvoker.java:95)
at org.openide.util.actions.ActionInvoker.doPerformAction(ActionInvoker.java:116)
at org.openide.util.actions.ActionInvoker.invokeAction(ActionInvoker.java:99)
at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:140)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242)
at javax.swing.AbstractButton.doClick(AbstractButton.java:357)
at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1223)
at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1264)
at java.awt.Component.processMouseEvent(Component.java:6263)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3267)
at java.awt.Component.processEvent(Component.java:6028)
at java.awt.Container.processEvent(Container.java:2041)
at java.awt.Component.dispatchEventImpl(Component.java:4630)
at java.awt.Container.dispatchEventImpl(Container.java:2099)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168)
at java.awt.Container.dispatchEventImpl(Container.java:2085)
at java.awt.Window.dispatchEventImpl(Window.java:2478)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:599)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:137)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
[catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
SEVERE [global]
java.lang.NullPointerException
at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:81)
at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:137)
at org.openide.util.actions.ActionInvoker$1.run(ActionInvoker.java:95)
at org.openide.util.actions.ActionInvoker.doPerformAction(ActionInvoker.java:116)
at org.openide.util.actions.ActionInvoker.invokeAction(ActionInvoker.java:99)
at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:140)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242)
at javax.swing.AbstractButton.doClick(AbstractButton.java:357)
at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1223)
at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1264)
at java.awt.Component.processMouseEvent(Component.java:6263)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3267)
at java.awt.Component.processEvent(Component.java:6028)
at java.awt.Container.processEvent(Container.java:2041)
at java.awt.Component.dispatchEventImpl(Component.java:4630)
at java.awt.Container.dispatchEventImpl(Container.java:2099)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168)
at java.awt.Container.dispatchEventImpl(Container.java:2085)
at java.awt.Window.dispatchEventImpl(Window.java:2478)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:599)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:137)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
[catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
WARNING [org.netbeans.modules.autoupdate.updateproviders.AutoupdateCatalogFactory]: Services/AutoupdateType/org_gephi_branding_desktop_update_center.instance: url_key attribute deprecated in favor of url
WARNING [org.netbeans.modules.autoupdate.updateproviders.AutoupdateCatalogFactory]: Services/AutoupdateType/org_gephi_branding_desktop_update_center_1.instance: url_key attribute deprecated in favor of urle
-------------------------------------------------------------------------------
>Log Session: Friday, October 15, 2010 4:38:22 PM EDT
>System Info:
Product Version = Gephi 0.7 beta
Operating System = Linux version 2.6.32-23-generic-pae running on i386
Java; VM; Vendor = 1.6.0_20; Java HotSpot(TM) Server VM 16.3-b01; Sun Microsystems Inc.
Runtime = Java(TM) SE Runtime Environment 1.6.0_20-b02
Java Home = /usr/lib/jvm/java-6-sun-1.6.0.20/jre
System Locale; Encoding = en_US (gephi07beta); UTF-8
Home Directory = /home/bd0077
Current Directory = /home/bd0077/Desktop
User Directory = /home/bd0077/.gephi07beta/dev
Installation = /home/bd0077/Desktop/gephi-0.7-beta/gephi07beta
/home/bd0077/Desktop/gephi-0.7-beta/platform
Boot & Ext. Classpath = /usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/resources.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/rt.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/sunrsasign.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/jsse.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/jce.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/charsets.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/classes:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/jogl-demos.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/localedata.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/dnsns.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/sunjce_provider.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/sunpkcs11.jar:/usr/lib/jvm/java-6-sun-1.6.0.20/jre/lib/ext/jogl.jar
Application Classpath = /home/bd0077/Desktop/gephi-0.7-beta/platform/lib/boot.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/org-openide-modules.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/org-openide-util.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/org-openide-util-lookup.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/boot_zh_TW.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-modules_zh_TW.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util-lookup_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/lib/locale/org-openide-util_zh_TW.jar:/usr/lib/jvm/java-6-sun/lib/dt.jar:/usr/lib/jvm/java-6-sun/lib/tools.jar
Startup Classpath = /home/bd0077/Desktop/gephi-0.7-beta/platform/core/org-openide-filesystems.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/core.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ar_SA.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ca.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_fr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_sv.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_zh_TW.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_gl_ES.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ko.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_zh_TW.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ja.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_pl.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_pt_PT.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_pt_BR.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_ru.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_zh_CN.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_ro.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_sq.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_de.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_cs.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_it.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_es.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/core_in_ID.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_tr.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_nl_NL.jar:/home/bd0077/Desktop/gephi-0.7-beta/platform/core/locale/org-openide-filesystems_in_ID.jar:/home/bd0077/Desktop/./gephi-0.7-beta/bin/../gephi07beta/core/locale/core_gephi07beta.jar
-------------------------------------------------------------------------------
INFO [org.netbeans.core.startup.NbEvents]: Turning on modules:
org.openide.util.lookup [8.3.1 201007282301]
org.openide.util [8.6.1 201007282301]
org.openide.modules [7.17.1 201007282301]
org.netbeans.swing.plaf [1.16.1 201007282301]
org.netbeans.libs.junit4 [1.9.1 201007282301]
org.gephi.utils.longtask [0.7.1 100930]
org.openide.filesystems [7.38.2 201007282301]
org.gephi.project.api [0.7.1 100930]
org.gephi.graph.api [0.7.1.3 101012]
org.gephi.data.attributes.api [0.7.1.1 100930]
org.gephi.dynamic.api [0.7.1 100930]
org.gephi.lib.javacsv [2.0 100930]
org.gephi.utils [0.7.1.1 101012]
org.gephi.datalab.api [0.7.1.3 101012]
org.gephi.lib.flamingo [5.0 100930]
org.gephi.clustering.api [0.7.1 100930]
org.gephi.clustering.plugin [0.7.1 100930]
org.openide.awt [7.23.1 201007282301]
org.netbeans.api.progress/1 [1.20.2 201007282301]
org.openide.dialogs [7.15.1 201007282301]
org.gephi.io.database.drivers [0.7.1 100930]
org.gephi.io.importer.api [0.7.1.3 101015]
org.gephi.io.spigot.plugin [0.8 100930]
org.gephi.io.processor.plugin [0.7.1.1 101001]
org.gephi.tools.api [0.7.1 100930]
org.gephi.ui.spigot.plugin [0.8 100930]
org.gephi.lib.beansbinding [1.2.1 100930]
org.openide.nodes [7.16.1 201007282301]
org.openide.windows [6.33.1 201007282301]
org.netbeans.modules.editor.mimelookup/1 [1.16.1 201007282301]
org.openide.text [6.30.1 201007282301]
org.netbeans.swing.tabcontrol [1.21.1 201007282301]
org.netbeans.swing.outline [1.9.1 201007282301]
org.openide.explorer [6.28.2 201007282301]
org.openide.actions [6.16.1 201007282301]
org.netbeans.bootstrap/1 [2.33.1 201007282301]
org.netbeans.core.startup/1 [1.25.1 201007282301]
org.netbeans.modules.queries/1 [1.19.1 201007282301]
org.openide.loaders [7.16.1 201007282301]
org.netbeans.modules.settings/1 [1.26.1 201007282301]
org.gephi.visualization.api [0.7.1.1 101012]
org.jfree [1.0 100930]
org.gephi.lib.validation [0.4 100930]
org.jdesktop.swingx [1.6.1 100930]
org.gephi.ui.utils [0.7.1 100930]
org.netbeans.spi.quicksearch [1.6.1 201007282301]
org.netbeans.modules.keyring [1.1.2 201007282301]
org.openide.io [1.23.1 201007282301]
org.netbeans.core/2 [3.20.2 201007282301]
org.netbeans.modules.options.api/1 [1.18.1 201007282301]
org.gephi.lib.gleem [1.0 100930]
org.gephi.lib.jogl [1.1.0.1 100930]
org.gephi.utils.collection [0.7.1 100930]
org.gephi.lib.commons.codec [1.4 100930]
org.gephi.ui.components [0.7.1 100930]
org.gephi.desktop.mrufiles.api [0.7.1 100930]
org.gephi.desktop.project [0.7.1 100930]
org.gephi.visualization [0.7.1.7 101015]
org.gephi.datalab.plugin [0.7.1.1 101012]
org.gephi.io.importer.plugin [0.7.1.5 101015]
org.gephi.ui.importer.plugin [0.7.1 100930]
org.netbeans.modules.favorites/1 [1.20.1 201007282301]
org.gephi.graph.dhns [0.7.1.5 101012]
org.gephi.preview.api [0.7.1 100930]
org.gephi.desktop.welcome [0.7.1 100930]
org.netbeans.libs.jna/1 [1.7.2 201007282301]
org.netbeans.core.windows/2 [2.21.1 201007282301]
org.netbeans.core.nativeaccess/1 [1.7.1 201007282301]
org.gephi.statistics.api [0.7.1.1 101003]
org.gephi.statistics.plugin [0.7.1 100930]
org.gephi.filters.api [0.7.1 100930]
org.gephi.timeline [0.7.1 100930]
org.gephi.partition.api [0.7.1.2 101014]
org.gephi.filters.plugin [0.7.1 100930]
org.gephi.lib.itext [5.0.1 100930]
org.joda.time [1.0 100930]
org.gephi.desktop.timeline [0.7.1 100930]
org.gephi.ui.propertyeditor [0.7.1 100930]
org.gephi.layout.api [0.7.1.1 101003]
org.gephi.plugins.layout.geo [1.0.2 100519]
org.gephi.lib.batik [1.7 100930]
org.gephi.io.exporter.api [0.7.1.2 100930]
org.gephi.io.exporter.preview [0.7.1.1 100930]
org.netbeans.modules.keyring.impl [1.0.1 201007282301]
org.gephi.lib.processing [1.0.9 100930]
org.gephi.preview [0.7.1.3 101012]
org.gephi.ui.components.SplineEditor [0.7 100930]
org.gephi.ranking.api [0.7.1 100930]
org.gephi.desktop.ranking [0.7.1 100930]
org.gephi.ui.workspace [0.7.1 100930]
org.gephi.ui.exporter.preview [0.7.1.1 100930]
org.gephi.desktop.hierarchy [0.7.1 100930]
org.gephi.desktop.spigot [0.8 100930]
org.netbeans.modules.options.keymap [1.10.1 201007282301]
org.gephi.layout.plugin [0.7.1.1 101006]
org.gephi.plugins.layout.noverlap [1.1 100519]
org.netbeans.modules.autoupdate.services [1.20.1 201007282301]
org.gephi.algorithms [0.7.1 100930]
org.gephi.desktop.layout [0.7.1.1 101003]
org.gephi.desktop.io.export [0.7.1.1 100930]
org.gephi.desktop.preview [0.7.1.1 101012]
org.gephi.io.generator.api [0.7.1 100930]
org.gephi.io.generator.plugin [0.7.1 100930]
org.gephi.ui.generator.plugin [0.7.1 100930]
org.gephi.geometricTransformation [1.0 100511]
org.netbeans.modules.progress.ui [1.12.1 201007282301]
org.gephi.desktop.filters [0.7.1.1 101012]
org.netbeans.modules.sendopts/2 [2.9.1 201007282301]
org.gephi.desktop.statistics [0.7.1 100930]
org.netbeans.modules.editor.mimelookup.impl/1 [1.9.1 201007282301]
org.netbeans.modules.masterfs/2 [2.25.2 201007282301]
org.gephi.lib.staxutils [1.0 100930]
org.gephi.io.exporter.plugin [0.7.1.5 101014]
org.gephi.ui.exporter.plugin [0.7.1.1 100930]
org.gephi.partition.plugin [0.7.1 100930]
org.gephi.data.attributes [0.7.1.2 100930]
org.gephi.desktop.importer [0.7.1.3 100930]
org.gephi.desktop.perspective [0.7.1 100930]
org.netbeans.core.io.ui/1 [1.8.1 201007282301]
org.gephi.desktop.context [0.7.1 100930]
org.netbeans.core.ui/1 [1.22.1 201007282301]
org.gephi.ui.partition.plugin [0.7.1.1 101014]
org.gephi.plugins.seadragon [0.1 101002]
org.gephi.plugins.seadragon.ui [0.1 101002]
org.gephi.desktop.clustering [0.7.1 100930]
org.gephi.ui.filters.plugin [0.7.1 100930]
org.netbeans.modules.print [7.5.1 201007282301]
org.gephi.desktop.progress [0.7.1 100930]
org.gephi.plugins.seadragonweb [0.2 101002]
org.gephi.ui.processor.plugin [0.7.1 100930]
org.gephi.ui.statistics.plugin [0.7.1 100930]
org.gephi.ui.project [0.7.1 100930]
org.gephi.layout.plugin.drl [1.0 101012]
org.gephi.desktop.generate [0.7.1 100930]
org.gephi.dynamic [0.7.1.2 101004]
org.gephi.desktop.partition [0.7.1 100930]
org.gephi.filters [0.7.1 100930]
org.netbeans.modules.autoupdate.ui [1.16.1 201007282301]
org.gephi.branding.desktop [0.7.1 100930]
org.netbeans.swing.dirchooser [1.0 100930]
org.gephi.ui.ranking.plugin [0.7.1 100930]
org.gephi.desktop.datalab [0.7.1.3 101015]
org.gephi.desktop.tools [0.7.1 100930]
org.gephi.tools.plugin [0.7.1 100930]
Loading native libraries
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.gephi.lib.jogl.JOGLNativesInstaller$1.run(JOGLNativesInstaller.java:102)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:199)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Caused by: java.lang.UnsatisfiedLinkError: com.sun.opengl.impl.x11.DRIHack.dlopen(Ljava/lang/String;)J
at com.sun.opengl.impl.x11.DRIHack.dlopen(Native Method)
at com.sun.opengl.impl.x11.DRIHack.begin(DRIHack.java:108)
... 13 more
INFO [org.netbeans.core.windows.persistence]: [PersistenceManager.getTopComponentForID] Problem when deserializing TopComponent for tcID:'GraphTopComponent'. Reason: Error reading MultiFileObject@b55c7f[Windows2Local/Components/GraphTopComponent.settings]: java.lang.reflect.InvocationTargetException
Content:
<?xml version="1.0" encoding="UTF-8"?>

<!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd">
<settings version="1.0">
<module name="org.gephi.visualization" spec="1.0"/>
<instanceof class="org.openide.windows.TopComponent"/>
<instanceof class="org.gephi.visualization.component.GraphTopComponent"/>
<instance class="org.gephi.visualization.component.GraphTopComponent" method="getDefault"/>
</settings>

Method: getDefault
Class: class org.gephi.visualization.component.GraphTopComponent
Content:
<?xml version="1.0" encoding="UTF-8"?>

<!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd">
<settings version="1.0">
<module name="org.gephi.visualization" spec="1.0"/>
<instanceof class="org.openide.windows.TopComponent"/>
<instanceof class="org.gephi.visualization.component.GraphTopComponent"/>
<instance class="org.gephi.visualization.component.GraphTopComponent" method="getDefault"/>
</settings>

Method: getDefault
Class: class org.gephi.visualization.component.GraphTopComponent
Caused: java.lang.UnsatisfiedLinkError: com.sun.opengl.impl.x11.DRIHack.dlopen(Ljava/lang/String;)J
at com.sun.opengl.impl.x11.DRIHack.dlopen(Native Method)
at com.sun.opengl.impl.x11.DRIHack.begin(DRIHack.java:108)
at com.sun.opengl.impl.x11.X11GLDrawableFactory.<clinit>(X11GLDrawableFactory.java:67)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:169)
at javax.media.opengl.GLDrawableFactory.getFactory(GLDrawableFactory.java:111)
at javax.media.opengl.GLCanvas.<init>(GLCanvas.java:113)
at javax.media.opengl.GLCanvas.<init>(GLCanvas.java:82)
at org.gephi.visualization.swing.GraphCanvas.<init>(GraphCanvas.java:49)
at org.gephi.visualization.config.VizCommander.createCanvas(VizCommander.java:33)
at org.gephi.visualization.VizController.initInstances(VizController.java:113)
at org.gephi.visualization.VizController.getInstance(VizController.java:69)
at org.gephi.visualization.component.GraphTopComponent.<init>(GraphTopComponent.java:62)
at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210)
Caused: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:673)
Caused: java.io.IOException: Error reading MultiFileObject@b55c7f[Windows2Local/Components/GraphTopComponent.settings]
at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:681)
at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.instanceCreate(XMLSettingsSupport.java:584)
at org.netbeans.modules.settings.convertors.SerialDataConvertor$SettingsInstance.instanceCreate(SerialDataConvertor.java:423)
at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentPersistentForID(PersistenceManager.java:533)
at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentForID(PersistenceManager.java:643)
at org.netbeans.core.windows.PersistenceHandler.getTopComponentForID(PersistenceHandler.java:460)
at org.netbeans.core.windows.PersistenceHandler.initModeFromConfig(PersistenceHandler.java:421)
at org.netbeans.core.windows.PersistenceHandler.load(PersistenceHandler.java:206)
at org.netbeans.core.windows.WindowSystemImpl.load(WindowSystemImpl.java:73)
at org.netbeans.core.GuiRunLevel$2.run(GuiRunLevel.java:181)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:137)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
[catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Content:
<?xml version="1.0" encoding="UTF-8"?>

<!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd">
<settings version="1.0">
<module name="org.gephi.visualization" spec="1.0"/>
<instanceof class="org.openide.windows.TopComponent"/>
<instanceof class="org.gephi.visualization.component.GraphTopComponent"/>
<instance class="org.gephi.visualization.component.GraphTopComponent" method="getDefault"/>
</settings>
ALL [null]: Method: getDefault
ALL [null]: Class: class org.gephi.visualization.component.GraphTopComponent
Diagnostic information
Input arguments:
-Djdk.home=/usr/lib/jvm/java-6-sun
-Dnetbeans.system_http_proxy=DIRECT
-Dnetbeans.system_http_non_proxy_hosts=
-Dnetbeans.dirs=./gephi-0.7-beta/bin/../gephi07beta:./gephi-0.7-beta/bin/../
:
-Dnetbeans.home=/home/bd0077/Desktop/gephi-0.7-beta/platform
-Xms2g
-Xmx2g
-Dsun.java2d.noddraw=true
-Dsun.awt.noerasebackground=true
-Duser.language=en
-XX:+HeapDumpOnOutOfMemoryError
-XX:HeapDumpPath=/home/bd0077/.gephi07beta/dev/var/log/heapdump.hprof
Compiler: HotSpot Tiered Compilers
Heap memory usage: initial 2048.0MB maximum 1962.7MB
Non heap memory usage: initial 18.2MB maximum 112.0MB
Garbage collector: PS Scavenge (Collections=0 Total time spent=0s)
Garbage collector: PS MarkSweep (Collections=0 Total time spent=0s)
Classes: loaded=5106 total loaded=5106 unloaded 0
INFO [org.netbeans.core.ui.warmup.DiagnosticTask]: Total memory 4,174,569,472
INFO [null]: Total physical memory 4,174,569,472
WARNING [org.openide.filesystems.Ordering]: Not all children in Menu/Window/ marked with the position attribute: [TimelineAction.shadow], but some are: [ClusteringAction.shadow, ContextAction.shadow, DataTableAction.shadow, FiltersAction.shadow, GraphAction.shadow, HierarchyAction.shadow, LayoutAction.shadow, PartitionAction.shadow, PreviewAction.shadow, PreviewSettingsAction.shadow, RankingAction.shadow, StatisticsAction.shadow, WelcomeAction.shadow, Separator3.instance, CloseWindowAction.shadow, MaximizeWindowAction.shadow, org-netbeans-core-windows-actions-UndockAction.shadow, Separator4.instance, Separator4_1.instance]
# Nodes loaded: 3418
# Edges loaded: 62452
WARNING [org.gephi.visualization.component.GraphTopComponent]: Cannot find GraphTopComponent component. It will not be located properly in the window system.
INFO [org.netbeans.core.startup.layers.BinaryFS]: value = org.gephi.visualization.component.GraphTopComponent.findInstance from Actions/Window/org-gephi-visualization-component-GraphAction.instance
java.lang.NullPointerException
at org.gephi.visualization.component.VizBarController$LabelGroupBar.getToolbarComponents(VizBarController.java:418)
at org.gephi.visualization.component.VizToolbar.<init>(VizToolbar.java:43)
at org.gephi.visualization.component.VizBarController.getToolbar(VizBarController.java:90)
at org.gephi.visualization.component.GraphTopComponent.initCollapsePanel(GraphTopComponent.java:91)
at org.gephi.visualization.component.GraphTopComponent.<init>(GraphTopComponent.java:65)
at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210)
at org.gephi.visualization.component.GraphTopComponent.findInstance(GraphTopComponent.java:223)
Caused: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.netbeans.core.startup.layers.BinaryFS$AttrImpl$MethodAndParams.invoke(BinaryFS.java:607)
at org.netbeans.core.startup.layers.BinaryFS$AttrImpl.getValue(BinaryFS.java:540)
at org.netbeans.core.startup.layers.BinaryFS$BFSBase.getAttribute(BinaryFS.java:386)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:907)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:844)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:903)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:844)
at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:772)
at org.netbeans.core.startup.layers.BinaryFS$FileMap.get(BinaryFS.java:955)
at org.openide.windows.OpenComponentAction.getTopComponent(OpenComponentAction.java:74)
at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:80)
at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:137)
at org.openide.util.actions.ActionInvoker$1.run(ActionInvoker.java:95)
at org.openide.util.actions.ActionInvoker.doPerformAction(ActionInvoker.java:116)
at org.openide.util.actions.ActionInvoker.invokeAction(ActionInvoker.java:99)
at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:140)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242)
at javax.swing.AbstractButton.doClick(AbstractButton.java:357)
at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1223)
at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1264)
at java.awt.Component.processMouseEvent(Component.java:6263)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3267)
at java.awt.Component.processEvent(Component.java:6028)
at java.awt.Container.processEvent(Container.java:2041)
at java.awt.Component.dispatchEventImpl(Component.java:4630)
at java.awt.Container.dispatchEventImpl(Container.java:2099)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168)
at java.awt.Container.dispatchEventImpl(Container.java:2085)
at java.awt.Window.dispatchEventImpl(Window.java:2478)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:599)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:137)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
[catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
SEVERE [global]
java.lang.NullPointerException
at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:81)
at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:137)
at org.openide.util.actions.ActionInvoker$1.run(ActionInvoker.java:95)
at org.openide.util.actions.ActionInvoker.doPerformAction(ActionInvoker.java:116)
at org.openide.util.actions.ActionInvoker.invokeAction(ActionInvoker.java:99)
at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:140)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242)
at javax.swing.AbstractButton.doClick(AbstractButton.java:357)
at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1223)
at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1264)
at java.awt.Component.processMouseEvent(Component.java:6263)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3267)
at java.awt.Component.processEvent(Component.java:6028)
at java.awt.Container.processEvent(Container.java:2041)
at java.awt.Component.dispatchEventImpl(Component.java:4630)
at java.awt.Container.dispatchEventImpl(Container.java:2099)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168)
at java.awt.Container.dispatchEventImpl(Container.java:2085)
at java.awt.Window.dispatchEventImpl(Window.java:2478)
at java.awt.Component.dispatchEvent(Component.java:4460)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:599)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:137)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
[catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
WARNING [org.netbeans.modules.autoupdate.updateproviders.AutoupdateCatalogFactory]: Services/AutoupdateType/org_gephi_branding_desktop_update_center.instance: url_key attribute deprecated in favor of url
WARNING [org.netbeans.modules.autoupdate.updateproviders.AutoupdateCatalogFactory]: Services/AutoupdateType/org_gephi_branding_desktop_update_center_1.instance: url_key attribute deprecated in favor of url
Top
bharath
Posts:3
Joined:13 Oct 2010 23:03
[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable

Re: Graph button in Window

Post by bharath » 26 Oct 2010 19:33

Can someone please help.
I want to try the edge bundling in Gephi..which is one the nice features compared to other tools.
But I could not get it running. Can someone help me with the problem I posted.

Thanks
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Post Reply
[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable

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