Can't get 0.8 beta to run on Mac OS X 10.7.3

[mbastian]

Hi,

can you find the messages.log and paste it here?

[albertocottica]

Hello Bastian, thanks for the reply. Unfortunately, as I was saying, I don't see any Gephi subdirectory in the Application Support directory. I tried a UNIX search command for *.log, but no messages.log was returned. Where else could I look for it?

[albertocottica]

Solved! Sorry, it was simply a n00b thing. I assumed the problem of not having Java in Leopard had been solved with Lion. Installing Java as per Gephi's website instructions did the trick:

https://gephi.org/users/install-java-6- ... x-leopard/

[asymptote]

I and several others are encountering this issue while trying to follow the Social Networks Analysis course on Coursera. It's causing quite some angst! To be clear the issue is that on running Gephi v0.8.1 beta a dialog box appears stating "Unable to load libjogl_awt.jnilib". This dialog box also appears when I build Gephi from source from the Github repository (commit: b69395c3a9f38e64bee30a546c55fb199ecd8ae7).

I'm running on OS X v10.8.2 with the following relevant Terminal output:

Code: Select all

(sna)Mill:01 ai$ /usr/libexec/java_home 
/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Home

(sna)Mill:01 ai$ java -version
java version "1.6.0_31"
Java(TM) SE Runtime Environment (build 1.6.0_31-b04-413-12A269)
Java HotSpot(TM) Client VM (build 20.6-b01-413, mixed mode)

(sna)Mill:bin ai$ ls -l /Library/Java/Extensions/ | wc -l
       0

(sna)Mill:01 ai$ ls -l /Users/ai/Library/Application\ Support/gephi/0.8.1/dev/var/log/
total 144
-rw-r--r--  1 ai  staff  21071  3 Oct 22:09 messages.log
-rw-r--r--  1 ai  staff  21074  3 Oct 21:53 messages.log.1
-rw-r--r--  1 ai  staff  21074  3 Oct 21:52 messages.log.2

(sna)Mill:01 ai$ cat /Users/ai/Library/Application\ Support/gephi/0.8.1/dev/var/log/messages.log
-------------------------------------------------------------------------------
>Log Session: Wednesday, October 3, 2012 10:09:23 PM BST
>System Info: 
  Product Version         = Gephi 0.8.1 beta 201202141941
  Operating System        = Mac OS X version 10.8.2 running on x86_64
  Java; VM; Vendor        = 1.6.0_31; Java HotSpot(TM) 64-Bit Server VM 20.6-b01-413; Apple Inc.
  Runtime                 = Java(TM) SE Runtime Environment 1.6.0_31-b04-413-12A269
  Java Home               = /Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Home
  System Locale; Encoding = en_US (gephi); MacRoman
  Home Directory          = /Users/ai
  Current Directory       = /Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi
  User Directory          = /Users/ai/Library/Application Support/gephi/0.8.1/dev
  Cache Directory         = /Users/ai/Library/Application Support/gephi/0.8.1/dev/var/cache
  Installation            = /Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/gephi
                            /Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform
  Boot & Ext. Classpath   = /Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Classes/jsfd.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Classes/classes.jar:/System/Library/Frameworks/JavaVM.framework/Frameworks/JavaRuntimeSupport.framework/Resources/Java/JavaRuntimeSupport.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Classes/ui.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Classes/laf.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Classes/sunrsasign.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Classes/jsse.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Classes/jce.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Classes/charsets.jar:/System/Library/Java/Extensions/MRJToolkit.jar:/System/Library/Java/Extensions/QTJava.zip:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Home/lib/ext/apple_provider.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Home/lib/ext/dnsns.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Home/lib/ext/localedata.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Home/lib/ext/sunjce_provider.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Home/lib/ext/sunpkcs11.jar
  Application Classpath   = /Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/boot.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/org-openide-modules.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/org-openide-util-lookup.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/org-openide-util.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_ar_SA.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_bg.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_ca.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_cs.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_de.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_es.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_fr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_gl_ES.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_in_ID.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_it.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_ja.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_ko.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_nl_NL.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_pl.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_pt_BR.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_pt_PT.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_ro.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_ru.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_si.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_sq.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_sv.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_tr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_zh_CN.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/boot_zh_TW.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_ar_SA.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_bg.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_ca.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_cs.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_de.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_es.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_fr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_gl_ES.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_in_ID.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_it.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_ja.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_ko.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_nl_NL.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_pl.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_pt_BR.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_pt_PT.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_ro.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_ru.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_si.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_sq.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_sv.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_tr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_zh_CN.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-modules_zh_TW.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_bg.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_ca.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_cs.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_de.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_es.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_fr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_gl_ES.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_in_ID.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_it.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_ja.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_ko.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_nl_NL.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_pl.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_pt_BR.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_ro.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_ru.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_si.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_sv.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_tr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util-lookup_zh_CN.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_ar_SA.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_bg.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_ca.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_cs.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_de.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_es.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_fr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_gl_ES.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_in_ID.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_it.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_ja.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_ko.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_nl_NL.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_pl.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_pt_BR.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_pt_PT.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_ro.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_ru.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_si.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_sq.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_sv.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_tr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_zh_CN.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/lib/locale/org-openide-util_zh_TW.jar:/Library/Java/JavaVirtualMachines/1.6.0_31-b04-413.jdk/Contents/Home/lib/dt.jar
  Startup Classpath       = /Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/core.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/org-openide-filesystems.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_ar_SA.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_bg.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_ca.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_cs.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_de.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_es.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_fr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_gl_ES.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_in_ID.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_it.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_ja.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_ko.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_nl_NL.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_pl.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_pt_BR.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_pt_PT.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_ro.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_ru.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_si.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_sq.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_sv.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_tr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_zh_CN.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/core_zh_TW.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_ar_SA.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_bg.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_ca.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_cs.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_de.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_es.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_fr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_gl_ES.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_in_ID.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_it.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_ja.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_ko.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_nl_NL.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_pl.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_pt_BR.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_pt_PT.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_ro.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_ru.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_si.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_sq.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_sv.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_tr.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_zh_CN.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/platform/core/locale/org-openide-filesystems_zh_TW.jar:/Users/ai/Programming/libs/gephi/dist/gephi.app/Contents/Resources/gephi/./bin/../gephi/core/locale/core_gephi.jar
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WARNING [org.netbeans.core.modules]: had to upgrade dependencies for module org.gephi.filters.api: added = [module org.openide.awt] removed = []; details: [SaveCookie extends Savable. To compile you need to include openide.awt on classpath.]
WARNING [org.netbeans.core.modules]: had to upgrade dependencies for module org.gephi.layout.api: added = [module org.openide.awt] removed = []; details: [SaveCookie extends Savable. To compile you need to include openide.awt on classpath.]
WARNING [org.netbeans.core.modules]: had to upgrade dependencies for module org.gephi.layout.plugin: added = [module org.openide.awt] removed = []; details: [SaveCookie extends Savable. To compile you need to include openide.awt on classpath.]
WARNING [org.netbeans.core.modules]: had to upgrade dependencies for module org.gephi.tools.plugin: added = [module org.openide.awt] removed = []; details: [SaveCookie extends Savable. To compile you need to include openide.awt on classpath.]
WARNING [org.netbeans.core.modules]: had to upgrade dependencies for module org.gephi.ui.project: added = [module org.openide.awt] removed = []; details: [SaveCookie extends Savable. To compile you need to include openide.awt on classpath.]
Loading native libraries

Please let me know if I can provide more information; I'm willing to build from source, provide more diagnostics, or anything else you require.

[jtbates]

I had this problem too. For some reason the symlink /System/Library/Frameworks/JavaVM.framework/Versions/CurrentJDK was pointing to a non-existant directory.

I installed the Java update from here: http://support.apple.com/kb/DL1572 and now Gephi runs.

BTW the symlink now points to /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents