Gephi forums

When trying to read a custom graphml file in gephi

I won't be able to filter for all columns e.g. http://imgur.com/a/o2zcQ will only show me vertex name nad not the label. What is wrong?

<?xml version="1.0" encoding="UTF-8"?>
<graphml xmlns="http://graphml.graphdrawing.org/xmlns"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns
http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
<!-- Created by igraph -->
<key id="v_name" for="node" attr.name="name" attr.type="string"/>
<key id="v_fraud" for="node" attr.name="label" attr.type="int"/>
<key id="e_edgeType" for="edge" attr.name="edgeType" attr.type="string"/>
<graph id="G" edgedefault="directed">

<node id="a">
<data key="v_name">Alice</data>
<data key="v_fraud">1</data>
</node>

<node id="b">
<data key="v_name">Bob</data>
<data key="v_fraud">0</data>
</node>

<node id="c">
<data key="v_name">Charlie</data>
<data key="v_fraud">0</data>
</node>

<node id="d">
<data key="v_name">David</data>
<data key="v_fraud">0</data>
</node>

<node id="e">
<data key="v_name">Esther</data>
<data key="v_fraud">0</data>
</node>

<node id="f">
<data key="v_name">Fanny</data>
<data key="v_fraud">0</data>
</node>

<node id="g">
<data key="v_name">Gabby</data>
<data key="v_fraud">0</data>
</node>


<edge source="a" target="b">
<data key="e_edgeType">A</data>
</edge>

<edge source="b" target="c">
<data key="e_edgeType">B</data>
</edge>

<edge source="c" target="b">
<data key="e_edgeType">B</data>
</edge>

<edge source="f" target="c">
<data key="e_edgeType">B</data>
</edge>

<edge source="e" target="f">
<data key="e_edgeType">B</data>
</edge>

<edge source="e" target="d">
<data key="e_edgeType">A</data>
</edge>

<edge source="d" target="a">
<data key="e_edgeType">A</data>
</edge>

<edge source="a" target="e">
<data key="e_edgeType">A</data>
</edge>

</graph>
</graphml>

It seems that id and label columns are not indexed, and therefore not available for partition.
But you can easily workaround this by duplicating the label column in data laboratory.

Can you please clarify what you mean with not indexed and how an indexed graphml file would look like?

Thanks a lot.

Sorry I mean it's not a problem with the file but with Gephi (may be fixed in future version), so it can't be changed and you will need to use the workaround.

Also, you can use another column in your graphml file different than label, and that one will be automatically available.

Thanks. This is solving my question.